Thanks to @frostschutz, I could measure the write performance in Linux without NCQ feature. The kernel boot parameter libata.force=noncq disabled NCQ completely.

In response to:

39441.061892] ata3.15: exception Emask 0x10 SAct 0x0 SErr 0x280100 action 0x6 frozen [39441.061897] ata3.15: irq_stat 0x08000000, interface fatal error [39441.061904] ata3.15: SError: { UnrecovData 10B8B BadCRC }

or similar error

How to add a kernel boot parameter:

https://askubuntu.com/questions/19486/how-do-i-add-a-kernel-boot-parameter